Systems Biology Layout & Rendering Service (SyBLaRS) is a web service to lay out graphs in SBGNML, SBML, GraphML and JSON
formats and produce corresponding images of the layouts with an option to highlight results from various graph queries in the backend.
This page presents a sample client-side demo for SyBLaRS.
To use the demo, please follow these steps:
- Open a file in one of the following formats: SBGNML, SBML, GraphML or JSON (or open one of the sample files)
- Select a layout style and modify corresponding layout options as desired
- Select an image format and image options as desired
- Select a query type and query options as desired if you want to highlight a subgraph of interest
- Click on "Apply Layout" button
- Now you can view/download layout info in "JSON" field and corresponding image in "Image" field
A video illustrating how to use this demo can be found on YouTube.
Here are the notations used for
SBGNML Stylesheet
SBML Stylesheet
GraphML & JSON Stylesheet
The source code of the service together with further details/help can be found here.
See here for third-party libraries used.